STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_05100Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase. (686 aa)    
Predicted Functional Partners:
cpoA
Glycosyl transferase CpoA.
  
 
 0.973
JF74_07310
Alkaline phosphatase.
  
 
 
0.939
rfaG
Group 1 glycosyl transferase.
  
 
 0.881
JF74_08690
Tetratricopeptide repeat family protein.
 
    0.749
mprF
Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
  
 0.736
murG
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
    
 0.709
JF74_05110
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
  
 0.703
JF74_18190
D-alanine transfer protein DltB; Could be involved in the transport of activated D-alanine through the membrane.
 
  
 0.693
JF74_07180
Putative site-specific DNA-methyltransferase (Adenine-specific).
  
     0.669
JF74_04810
Glycosyltransferase group 1 protein.
  
 
 0.655
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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