STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_05860Uncharacterized protein. (78 aa)    
Predicted Functional Partners:
JF74_00380
Hypothetical protein.
 
     0.768
JF74_00340
Uncharacterized protein.
 
     0.744
JF74_04730
Uncharacterized protein.
  
     0.740
JF74_17100
Hypothetical protein.
 
     0.702
JF74_00400
Uncharacterized protein.
 
     0.658
JF74_00430
Uncharacterized protein.
 
     0.654
coiA
Competence protein.
  
     0.634
JF74_16840
Histone acetyltransferase HPA2.
  
     0.566
JF74_00860
Uncharacterized protein; Belongs to the LysR transcriptional regulatory family.
  
     0.537
JF74_05870
PTS Glc IIA.
     
 0.479
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.