STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_08900Phage integrase family site-specific recombinase; Belongs to the 'phage' integrase family. (361 aa)    
Predicted Functional Partners:
JF74_06780
Phosphate acetyltransferase.
   
 0.717
hslV
ATP-dependent protease HslVU; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.673
JF74_03610
Uncharacterized protein; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
  
 0.660
hslU
ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
  
 0.654
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.647
JF74_15300
Uncharacterized protein; Belongs to the SOS response-associated peptidase family.
  
  
 0.637
whiA
Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.
  
  
 0.620
JF74_06430
Competence protein.
  
    0.612
JF74_01180
Exodeoxyribonuclease A.
  
 
  0.593
JF74_00220
Beta-glucosidase Bgl3E.
  
 
 0.566
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.