STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabDAcyl transferase region. (301 aa)    
Predicted Functional Partners:
mdcD
Malonate decarboxylase, beta subunit.
 
 
 0.996
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 0.995
dltC
D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
 0.993
fabG
3-oxoacyl-[acyl-carrier-protein] reductase.
 0.990
mdcC
Malonate decarboxylase acyl carrier protein.
 
 
 0.987
JF74_11010
Malonate decarboxylase alpha subunit.
 
 
 0.986
JF74_04430
2 deoxy-D-gluconate 3-dehydrogenase.
 
 0.985
JF74_17930
Short-chain alcohol dehydrogenase.
 
 0.984
JF74_10980
Phosphoribosyl-dephospho-CoA transferase.
 
  
 0.972
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
 
 0.972
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.