STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_11720Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
JF74_02140
Bacteriocin helveticin-J.
  
     0.765
JF74_15270
Beta-propeller domain of methanol dehydrogenase type.
  
     0.753
JF74_06750
Uncharacterized protein.
  
     0.740
JF74_15800
Uncharacterized protein.
  
     0.729
JF74_15560
Putative glucan modifying protein.
  
     0.728
JF74_08890
Transcriptional regulator, XRE family protein.
  
     0.724
JF74_15590
Uncharacterized protein.
  
     0.711
mreD
Rod shape-determining protein MreD.
  
     0.674
JF74_02870
CvpA family protein.
  
     0.667
JF74_03750
Beta-lactamase class A.
  
     0.661
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.