STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_13720PTS Fru IIB. (105 aa)    
Predicted Functional Partners:
JF74_13710
PTS Fru IIC.
 
 
 0.995
JF74_13730
PTS Fru IIA.
 
 
 0.992
JF74_15940
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.980
JF74_06110
Phosphocarrier protein HPr.
  
 
 0.960
JF74_12510
PTS Fru IIC.
 
 
 0.947
fba
Fructose-1,6-bisphosphate aldolase.
  
 
 0.941
JF74_15930
PTS Fru IIABC.
 
 
0.939
JF74_14790
Fructokinase.
  
 
 0.936
JF74_13680
PRD domain protein.
 
 
 0.932
JF74_17690
PTS Man IIB.
  
 
 0.907
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.