STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_15840ABC-type amino acid transport system, permease and periplasmic component. (498 aa)    
Predicted Functional Partners:
JF74_15830
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.999
JF74_01920
Amino acid ABC transporter, ATP-binding protein.
 0.996
JF74_05420
ABC-type polar amino acid transport system, ATPase component.
 0.994
JF74_12220
ABC-type polar amino acid transport system, ATPase component.
 0.994
JF74_14480
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.993
JF74_18380
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.992
JF74_01930
Putative glutamine ABC transporter.
 
0.971
JF74_02970
Putative osmoprotectant ABC transporter permease/substrate-binding protein.
    
 0.914
JF74_07040
Macrolide ABC transporter.
 
 0.891
JF74_02340
ABC transporter ATP-binding protein.
 
 0.886
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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