Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JG29_00550 | JG29_00560 | JG29_00550 | JG29_00560 | Macro domain protein. | Cadmium-/zinc-/cobalt-transporting ATPase. | 0.512 |
JG29_00550 | JG29_11530 | JG29_00550 | JG29_11530 | Macro domain protein. | ATPase, AAA family. | 0.551 |
JG29_00550 | JG29_12570 | JG29_00550 | JG29_12570 | Macro domain protein. | ABC-type proline/glycine betaine transport system, permease and substrate binding protein. | 0.406 |
JG29_00550 | cmk | JG29_00550 | JG29_09570 | Macro domain protein. | Cytidylate kinase. | 0.658 |
JG29_00550 | npr | JG29_00550 | JG29_05480 | Macro domain protein. | NADH peroxidase. | 0.573 |
JG29_00550 | prs | JG29_00550 | JG29_02970 | Macro domain protein. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.445 |
JG29_00550 | rara1 | JG29_00550 | JG29_10530 | Macro domain protein. | Recombination factor. | 0.713 |
JG29_00560 | JG29_00550 | JG29_00560 | JG29_00550 | Cadmium-/zinc-/cobalt-transporting ATPase. | Macro domain protein. | 0.512 |
JG29_11530 | JG29_00550 | JG29_11530 | JG29_00550 | ATPase, AAA family. | Macro domain protein. | 0.551 |
JG29_12570 | JG29_00550 | JG29_12570 | JG29_00550 | ABC-type proline/glycine betaine transport system, permease and substrate binding protein. | Macro domain protein. | 0.406 |
cmk | JG29_00550 | JG29_09570 | JG29_00550 | Cytidylate kinase. | Macro domain protein. | 0.658 |
npr | JG29_00550 | JG29_05480 | JG29_00550 | NADH peroxidase. | Macro domain protein. | 0.573 |
prs | JG29_00550 | JG29_02970 | JG29_00550 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | Macro domain protein. | 0.445 |
rara1 | JG29_00550 | JG29_10530 | JG29_00550 | Recombination factor. | Macro domain protein. | 0.713 |