STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG29_02810Nucleoside 2-deoxyribosyltransferase. (158 aa)    
Predicted Functional Partners:
JG29_04670
Colicin V production protein.
  
     0.619
JG29_01270
Extracellular protein.
  
     0.603
JG29_13360
Membrane protein.
 
     0.530
JG29_01020
Putative thiamine transporter protein.
  
     0.511
JG29_01140
Hypothetical protein.
  
     0.508
JG29_07410
Hypothetical protein.
  
     0.504
ami
N-acetylmuramoyl-L-alanine amidase family protein.
  
     0.481
JG29_01540
Uncharacterized protein.
  
     0.462
JG29_06050
Uncharacterized protein.
  
     0.460
JG29_11050
Uncharacterized protein.
  
     0.428
Your Current Organism:
Lactobacillus mellis
NCBI taxonomy Id: 1218508
Other names: CCUG 63289, DSM 26255, L. mellis, Lactobacillus mellis Olofsson et al. 2014, Lactobacillus sp. H1HS38N, Lactobacillus sp. Hon2, Lactobacillus sp. Hon2N, strain Hon2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.