STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrp7Two-component system response regulator. (241 aa)    
Predicted Functional Partners:
JG29_11070
Two-component system, sensor histidine kinase.
 0.984
JG29_05950
Sensor histidine kinase.
 0.966
JG29_15230
Two-component system, sensor histidine kinase.
 0.932
JG29_04220
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 0.906
JG29_11790
Hypothetical protein.
 
 0.906
JG29_00440
Two-component system, sensor histidine kinase.
 0.894
cobA
Uroporphyrinogen-III C-methyltransferase.
     
 0.793
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.784
JG29_11090
HAD superfamily hydrolase.
     
 0.720
JG29_08250
Hypothetical protein.
   
 0.570
Your Current Organism:
Lactobacillus mellis
NCBI taxonomy Id: 1218508
Other names: CCUG 63289, DSM 26255, L. mellis, Lactobacillus mellis Olofsson et al. 2014, Lactobacillus sp. H1HS38N, Lactobacillus sp. Hon2, Lactobacillus sp. Hon2N, strain Hon2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.