STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG29_13880PTS Man IIA. (147 aa)    
Predicted Functional Partners:
JG29_13850
PTS Man IID.
 
 0.995
JG29_13860
PTS Man IIC.
 
 0.995
JG29_13870
PTS Man IIB.
 
 
 0.995
JG29_09760
PTS Fru IIABC.
  
 
 0.980
JG29_13520
PTS Man IID.
 
 0.979
JG29_13530
PTS Man IIC.
 
 0.979
JG29_12260
Phosphocarrier protein Hpr.
  
 0.964
JG29_13540
PTS Man IIB.
 
 
 0.921
JG29_13890
PRD domain transcriptional regulator.
 
  
 0.919
JG29_04460
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.811
Your Current Organism:
Lactobacillus mellis
NCBI taxonomy Id: 1218508
Other names: CCUG 63289, DSM 26255, L. mellis, Lactobacillus mellis Olofsson et al. 2014, Lactobacillus sp. H1HS38N, Lactobacillus sp. Hon2, Lactobacillus sp. Hon2N, strain Hon2N
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.