STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG29_14480Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
JG29_14490
Flavodoxin.
    
  0.842
JG29_07750
Hypothetical protein.
  
 
  0.774
JG29_08980
Cupin superfamily protein.
  
 
  0.764
cobC2
Alpha-ribazole-5'-phosphate phosphatase.
       0.682
JG29_13260
Saccharopine dehydrogenase related protein.
  
    0.566
JG29_14910
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
    
 0.553
JG29_14130
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.549
JG29_13580
Hypothetical protein.
  
 
  0.513
spxA
Regulatory protein spx; Belongs to the ArsC family.
  
  
 0.504
JG29_14470
Major facilitator superfamily protein.
       0.502
Your Current Organism:
Lactobacillus mellis
NCBI taxonomy Id: 1218508
Other names: CCUG 63289, DSM 26255, L. mellis, Lactobacillus mellis Olofsson et al. 2014, Lactobacillus sp. H1HS38N, Lactobacillus sp. Hon2, Lactobacillus sp. Hon2N, strain Hon2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.