STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG29_14700Response regulator. (189 aa)    
Predicted Functional Partners:
JG29_14690
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
   
 0.972
JG29_14670
Ethanolamine utilization protein EutA.
 
   
 0.887
cobA
Uroporphyrinogen-III C-methyltransferase.
  
 
 0.830
JG29_14640
Microcompartments protein.
 
   
 0.830
JG29_14560
Ethanolamine utilization EutQ family protein.
 
   
 0.803
eutH
Ethanolamine utilization protein EutH.
 
   
 0.780
JG29_14530
Uncharacterized protein; Belongs to the EutP/PduV family.
 
   
 0.677
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
   
 0.651
JG29_14710
Iron-containing alcohol dehydrogenase.
       0.620
JG29_14660
Ethanolamine ammonia-lyase, large subunit.
     
 0.584
Your Current Organism:
Lactobacillus mellis
NCBI taxonomy Id: 1218508
Other names: CCUG 63289, DSM 26255, L. mellis, Lactobacillus mellis Olofsson et al. 2014, Lactobacillus sp. H1HS38N, Lactobacillus sp. Hon2, Lactobacillus sp. Hon2N, strain Hon2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.