STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMY70578.1Transcriptional regulator, Fis family. (438 aa)    
Predicted Functional Partners:
fliN_1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.908
EMY70541.1
Hypothetical protein.
       0.834
EMY71863.1
PAS domain S-box protein.
  
 0.817
EMY70658.1
PAS domain S-box protein.
  
 0.817
EMY68126.1
Putative flagellar biosynthesis protein FlhG.
  
 0.803
EMY68310.1
PAS domain S-box protein.
   
 0.792
EMY69413.1
PAS domain S-box protein.
   
 0.792
EMY70824.1
GHKL domain protein.
   
 0.792
EMY68879.1
Response regulator receiver domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 0.775
EMY68133.1
PAS domain S-box protein.
  
 0.769
Your Current Organism:
Leptospira vanthielii
NCBI taxonomy Id: 1218591
Other names: L. vanthielii serovar Holland str. Waz Holland = ATCC 700522, Leptospira genomosp. 3 str. ATCC 700522, Leptospira vanthielii serovar Holland str. ATCC 700522 = Waz Holland, Leptospira vanthielii serovar Holland str. Waz Holland, Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522
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