Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EOQ96270.1 | EOQ96758.1 | LEP1GSC195_3358 | LEP1GSC195_3360 | TonB-dependent receptor. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.592 |
EOQ96270.1 | EOQ97020.1 | LEP1GSC195_3358 | LEP1GSC195_3356 | TonB-dependent receptor. | Hypothetical protein. | 0.801 |
EOQ96270.1 | EOQ97370.1 | LEP1GSC195_3358 | LEP1GSC195_3359 | TonB-dependent receptor. | HmuY protein. | 0.804 |
EOQ96525.1 | EOQ96758.1 | LEP1GSC195_3364 | LEP1GSC195_3360 | Peptidase, M23 family. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.530 |
EOQ96525.1 | EOQ97020.1 | LEP1GSC195_3364 | LEP1GSC195_3356 | Peptidase, M23 family. | Hypothetical protein. | 0.407 |
EOQ96525.1 | EOQ97370.1 | LEP1GSC195_3364 | LEP1GSC195_3359 | Peptidase, M23 family. | HmuY protein. | 0.415 |
EOQ96758.1 | EOQ96270.1 | LEP1GSC195_3360 | LEP1GSC195_3358 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | TonB-dependent receptor. | 0.592 |
EOQ96758.1 | EOQ96525.1 | LEP1GSC195_3360 | LEP1GSC195_3364 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Peptidase, M23 family. | 0.530 |
EOQ96758.1 | EOQ97020.1 | LEP1GSC195_3360 | LEP1GSC195_3356 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.655 |
EOQ96758.1 | EOQ97370.1 | LEP1GSC195_3360 | LEP1GSC195_3359 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | HmuY protein. | 0.673 |
EOQ97020.1 | EOQ96270.1 | LEP1GSC195_3356 | LEP1GSC195_3358 | Hypothetical protein. | TonB-dependent receptor. | 0.801 |
EOQ97020.1 | EOQ96525.1 | LEP1GSC195_3356 | LEP1GSC195_3364 | Hypothetical protein. | Peptidase, M23 family. | 0.407 |
EOQ97020.1 | EOQ96758.1 | LEP1GSC195_3356 | LEP1GSC195_3360 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.655 |
EOQ97020.1 | EOQ97370.1 | LEP1GSC195_3356 | LEP1GSC195_3359 | Hypothetical protein. | HmuY protein. | 0.835 |
EOQ97370.1 | EOQ96270.1 | LEP1GSC195_3359 | LEP1GSC195_3358 | HmuY protein. | TonB-dependent receptor. | 0.804 |
EOQ97370.1 | EOQ96525.1 | LEP1GSC195_3359 | LEP1GSC195_3364 | HmuY protein. | Peptidase, M23 family. | 0.415 |
EOQ97370.1 | EOQ96758.1 | LEP1GSC195_3359 | LEP1GSC195_3360 | HmuY protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.673 |
EOQ97370.1 | EOQ97020.1 | LEP1GSC195_3359 | LEP1GSC195_3356 | HmuY protein. | Hypothetical protein. | 0.835 |