STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBUnannotated protein. (345 aa)    
Predicted Functional Partners:
appC
Unannotated protein.
 
 0.999
cydD
Unannotated protein.
 
  
 0.998
GCA_001895045_03036
Unannotated protein.
 
  
 0.996
GCA_001895045_01346
Unannotated protein.
  
  
 0.740
sdhC
Unannotated protein.
     
 0.705
sdhA1
Unannotated protein.
    
 0.672
sdhA2
Unannotated protein.
    
 0.672
petB
Unannotated protein.
     
 0.632
sdhB1
Unannotated protein.
    
 0.627
sdhB
Unannotated protein.
    
 0.627
Your Current Organism:
Rhodococcus coprophilus
NCBI taxonomy Id: 1219011
Other names: R. coprophilus NBRC 100603, Rhodococcus coprophilus NBRC 100603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.