STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metZUnannotated protein; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (407 aa)    
Predicted Functional Partners:
cbs
Unannotated protein.
 
 0.988
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.970
cysK1
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.969
metX
Unannotated protein; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
 
  
 0.963
metE1
Unannotated protein; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.956
cysK
Unannotated protein.
  
 0.956
sirA
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.954
mdeA
Unannotated protein.
 
 
0.943
ahcY
Unannotated protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
 
 0.942
patB
Unannotated protein.
 
 
 0.941
Your Current Organism:
Rhodococcus coprophilus
NCBI taxonomy Id: 1219011
Other names: R. coprophilus NBRC 100603, Rhodococcus coprophilus NBRC 100603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.