STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001895005_01519Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001895005_01518
Unannotated protein.
  
 
  0.953
GCA_001895005_00393
Unannotated protein.
    
 0.917
GCA_001895005_01517
Unannotated protein.
   
 
 0.904
GCA_001895005_01516
Unannotated protein.
   
 
 0.890
GCA_001895005_05600
Unannotated protein.
   
 0.851
GCA_001895005_05727
Unannotated protein.
   
 0.851
GCA_001895005_00879
Unannotated protein.
    
 0.767
GCA_001895005_01385
Unannotated protein.
   
  0.713
GCA_001895005_01548
Unannotated protein.
   
  0.713
GCA_001895005_01936
Unannotated protein.
   
  0.713
Your Current Organism:
Rhodococcus yunnanensis
NCBI taxonomy Id: 1219029
Other names: R. yunnanensis NBRC 103083, Rhodococcus yunnanensis NBRC 103083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.