STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001895005_02017Unannotated protein. (206 aa)    
Predicted Functional Partners:
GCA_001895005_02019
Unannotated protein.
 
     0.760
GCA_001895005_02018
Unannotated protein.
       0.735
GCA_001895005_00507
Unannotated protein.
   
 
 0.467
GCA_001895005_02020
Unannotated protein.
       0.467
GCA_001895005_00837
Unannotated protein.
     
 0.460
GCA_001895005_01653
Unannotated protein.
     
 0.444
GCA_001895005_01655
Unannotated protein.
     
 0.425
GCA_001895005_05525
Unannotated protein.
    
  0.424
GCA_001895005_05526
Unannotated protein.
    
  0.416
GCA_001895005_00511
Unannotated protein.
    
  0.410
Your Current Organism:
Rhodococcus yunnanensis
NCBI taxonomy Id: 1219029
Other names: R. yunnanensis NBRC 103083, Rhodococcus yunnanensis NBRC 103083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.