STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001895005_02470Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_001895005_02468
Unannotated protein.
       0.822
GCA_001895005_02469
Unannotated protein.
       0.822
GCA_001895005_03773
Unannotated protein.
  
     0.710
GCA_001895005_00468
Unannotated protein.
  
     0.674
GCA_001895005_00347
Unannotated protein.
  
     0.647
GCA_001895005_02471
Unannotated protein.
       0.643
GCA_001895005_02466
Unannotated protein.
       0.622
GCA_001895005_04580
Unannotated protein.
  
     0.622
GCA_001895005_05691
Unannotated protein.
  
     0.614
GCA_001895005_04900
Unannotated protein.
  
     0.555
Your Current Organism:
Rhodococcus yunnanensis
NCBI taxonomy Id: 1219029
Other names: R. yunnanensis NBRC 103083, Rhodococcus yunnanensis NBRC 103083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.