STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598335_00114Unannotated protein. (448 aa)    
Predicted Functional Partners:
GCA_001598335_02486
Unannotated protein.
 
  
 0.947
GCA_001598335_02512
Unannotated protein.
 
  
 0.919
GCA_001598335_00486
Unannotated protein.
 
  
  0.880
GCA_001598335_01972
Unannotated protein.
 
  
 
0.842
GCA_001598335_02502
Unannotated protein.
  
 
 0.817
GCA_001598335_00824
Unannotated protein.
    
  0.784
GCA_001598335_03579
Unannotated protein.
 
   
 0.779
GCA_001598335_02501
Unannotated protein.
    
  0.777
GCA_001598335_03005
Unannotated protein.
    
  0.777
GCA_001598335_01908
Unannotated protein.
 
     0.770
Your Current Organism:
Sphingobium abikonense
NCBI taxonomy Id: 1219036
Other names: S. abikonense NBRC 16140, Sphingobium abikonense NBRC 16140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.