STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598335_02326Unannotated protein. (665 aa)    
Predicted Functional Partners:
GCA_001598335_01270
Unannotated protein.
 
 0.983
GCA_001598335_00580
Unannotated protein.
  
 
 0.976
GCA_001598335_01276
Unannotated protein.
   
 
 0.973
GCA_001598335_01237
Unannotated protein.
   
 
 0.969
GCA_001598335_00585
Unannotated protein.
   
 
 0.967
GCA_001598335_00599
Unannotated protein.
   
 
 0.967
GCA_001598335_02442
Unannotated protein.
   
 
 0.965
GCA_001598335_01232
Unannotated protein.
  
 
 0.963
GCA_001598335_00593
Unannotated protein.
   
 
 0.961
GCA_001598335_00597
Unannotated protein.
  
 
 0.961
Your Current Organism:
Sphingobium abikonense
NCBI taxonomy Id: 1219036
Other names: S. abikonense NBRC 16140, Sphingobium abikonense NBRC 16140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.