STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598355_03714Unannotated protein. (823 aa)    
Predicted Functional Partners:
GCA_001598355_01972
Unannotated protein.
  
 
  0.779
GCA_001598355_02544
Unannotated protein.
  
 
  0.765
GCA_001598355_02115
Unannotated protein.
  
  
  0.764
GCA_001598355_01831
Unannotated protein.
  
  
  0.762
GCA_001598355_00198
Unannotated protein.
  
  
  0.760
GCA_001598355_02540
Unannotated protein.
  
 
  0.749
GCA_001598355_02276
Unannotated protein.
  
  0.742
GCA_001598355_03639
Unannotated protein.
  
  
  0.725
GCA_001598355_04310
Unannotated protein.
  
  
 0.724
GCA_001598355_02232
Unannotated protein.
  
  
  0.718
Your Current Organism:
Sphingomonas asaccharolytica
NCBI taxonomy Id: 1219040
Other names: S. asaccharolytica NBRC 15499, Sphingomonas asaccharolytica NBRC 15499
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.