STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAO38156.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
GAO38157.1
Putative ABC transporter ATP-binding protein.
 
 0.999
GAO38158.1
Putative ABC transporter permease protein.
 
 0.999
GAO38155.1
Hypothetical protein.
 
  0.980
GAO40247.1
Hypothetical protein.
  
 0.936
GAO39782.1
Hypothetical protein.
   
   0.827
motB
Chemotaxis protein MotB.
   
   0.827
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.564
lptD
Putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.511
gltB
Glutamate synthase large subunit.
       0.510
GAO40949.1
Hypothetical protein.
       0.510
Your Current Organism:
Sphingomonas changbaiensis
NCBI taxonomy Id: 1219043
Other names: S. changbaiensis NBRC 104936, Sphingomonas changbaiensis NBRC 104936, Sphingomonas changbaiensis V2M44, Sphingomonas sp. V2M44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.