STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAO40125.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
GAO38728.1
Hypothetical protein.
  
 
   0.528
GAO38843.1
Hypothetical protein; Belongs to the UbiA prenyltransferase family.
  
     0.527
GAO39455.1
Hypothetical protein.
   
   0.498
GAO39351.1
Hypothetical protein.
   
   0.496
GAO39108.1
Hypothetical protein.
  
  
  0.491
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.488
GAO38061.1
Hypothetical protein.
  
     0.478
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.462
GAO40124.1
Putative exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
    0.446
GAO38176.1
Putative TonB-dependent receptor.
    
   0.444
Your Current Organism:
Sphingomonas changbaiensis
NCBI taxonomy Id: 1219043
Other names: S. changbaiensis NBRC 104936, Sphingomonas changbaiensis NBRC 104936, Sphingomonas changbaiensis V2M44, Sphingomonas sp. V2M44
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.