STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598415_00156Unannotated protein. (353 aa)    
Predicted Functional Partners:
GCA_001598415_04392
Unannotated protein.
  
     0.773
GCA_001598415_00669
Unannotated protein.
  
     0.622
GCA_001598415_00562
Unannotated protein.
  
     0.575
GCA_001598415_02588
Unannotated protein.
  
     0.541
GCA_001598415_00088
Unannotated protein.
     
 0.433
GCA_001598415_00157
Unannotated protein.
       0.414
Your Current Organism:
Sphingomonas mali
NCBI taxonomy Id: 1219048
Other names: S. mali NBRC 15500, Sphingomonas mali NBRC 15500
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.