STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598415_04062Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_001598415_04060
Unannotated protein.
 
 
 0.997
GCA_001598415_04061
Unannotated protein.
 
 
 0.991
GCA_001598415_01635
Unannotated protein.
 
 0.972
GCA_001598415_04058
Unannotated protein.
 
  
 0.964
GCA_001598415_00800
Unannotated protein.
  
 
 0.921
GCA_001598415_04165
Unannotated protein.
    
 0.920
GCA_001598415_02549
Unannotated protein.
  
 
 0.913
GCA_001598415_01295
Unannotated protein.
  
  
 
0.911
GCA_001598415_04594
Unannotated protein.
     
 0.906
GCA_001598415_04404
Unannotated protein.
     
 0.904
Your Current Organism:
Sphingomonas mali
NCBI taxonomy Id: 1219048
Other names: S. mali NBRC 15500, Sphingomonas mali NBRC 15500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.