STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598435_01344Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_001598435_00420
Unannotated protein.
 
    0.793
GCA_001598435_04116
Unannotated protein.
  
  
 0.782
GCA_001598435_03018
Unannotated protein.
 
  
 0.735
GCA_001598435_03359
Unannotated protein.
  
  
 0.708
GCA_001598435_01342
Unannotated protein.
       0.651
GCA_001598435_01343
Unannotated protein.
       0.651
GCA_001598435_00693
Unannotated protein.
    
 0.615
GCA_001598435_03861
Unannotated protein.
 
   
 0.607
GCA_001598435_04114
Unannotated protein.
 
   
 0.601
GCA_001598435_03913
Unannotated protein.
  
  
 0.586
Your Current Organism:
Sphingomonas pituitosa
NCBI taxonomy Id: 1219051
Other names: S. pituitosa NBRC 102491, Sphingomonas pituitosa NBRC 102491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.