STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598455_00144Unannotated protein. (309 aa)    
Predicted Functional Partners:
GCA_001598455_01376
Unannotated protein.
 0.998
GCA_001598455_04083
Unannotated protein.
 
 
 0.996
GCA_001598455_01445
Unannotated protein.
 
 
 0.988
GCA_001598455_03228
Unannotated protein.
 
 
 0.972
GCA_001598455_02016
Unannotated protein.
 
  
 0.965
GCA_001598455_01738
Unannotated protein.
  
  
 0.955
GCA_001598455_00142
Unannotated protein.
       0.877
GCA_001598455_00143
Unannotated protein.
       0.877
GCA_001598455_00673
Unannotated protein.
  
  
 0.737
GCA_001598455_03631
Unannotated protein.
  
  
 0.703
Your Current Organism:
Sphingomonas pruni
NCBI taxonomy Id: 1219052
Other names: S. pruni NBRC 15498, Sphingomonas pruni NBRC 15498
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.