STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598555_04357Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_001598555_05486
Unannotated protein.
 
 0.989
GCA_001598555_03226
Unannotated protein.
  
 
 0.879
GCA_001598555_05054
Unannotated protein.
  
 
 0.842
GCA_001598555_04356
Unannotated protein.
       0.809
GCA_001598555_05487
Unannotated protein.
 
 0.738
GCA_001598555_02442
Unannotated protein.
    
 0.731
GCA_001598555_04352
Unannotated protein.
 
     0.710
GCA_001598555_04355
Unannotated protein.
       0.696
GCA_001598555_03541
Unannotated protein.
  
  
  0.679
GCA_001598555_05485
Unannotated protein.
 
 0.630
Your Current Organism:
Novosphingobium rosa
NCBI taxonomy Id: 1219053
Other names: N. rosa NBRC 15208, Novosphingobium rosa NBRC 15208, Sphingomonas rosa NBRC 15208
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.