STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001591025_03393Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_001591025_03392
Unannotated protein.
  
 0.986
GCA_001591025_03398
Unannotated protein.
 
 
 0.978
GCA_001591025_03399
Unannotated protein.
  
  
 0.974
GCA_001591025_03396
Unannotated protein.
  
    0.940
GCA_001591025_02407
Unannotated protein.
  
 0.936
GCA_001591025_01350
Unannotated protein.
  
  
 0.933
GCA_001591025_01363
Unannotated protein.
  
  0.912
GCA_001591025_03149
Unannotated protein.
   
 0.909
GCA_001591025_03391
Unannotated protein.
  
  
 0.903
GCA_001591025_00512
Unannotated protein.
 
 0.887
Your Current Organism:
Sphingomonas soli
NCBI taxonomy Id: 1219055
Other names: S. soli NBRC 100801, Sphingomonas soli NBRC 100801
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.