STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsDNA protection during starvation protein; Belongs to the Dps family. (158 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.890
GAD66852.1
Hypothetical protein.
    
   0.766
copA
Copper-transporting P-type ATPase CopA.
  
  
 0.683
GAD67944.1
Putative peroxiredoxin.
  
  
 0.667
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.667
raiA
Ribosome-associated inhibitor A.
 
    0.658
GAD66145.1
Hypothetical protein.
   
    0.626
wrbA
NAD(P)H--quinone oxidoreductase; Belongs to the WrbA family.
  
  
 0.618
wrbA-2
NAD(P)H--quinone oxidoreductase.
  
  
 0.618
GAD66435.1
Putative sigma-54 modulation protein.
  
    0.607
Your Current Organism:
Vibrio proteolyticus
NCBI taxonomy Id: 1219065
Other names: V. proteolyticus NBRC 13287, Vibrio proteolyticus NBRC 13287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.