Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAD78943.1 | tnaA | VEZ01S_07_01200 | VEZ01S_18_00040 | Hypothetical protein. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.518 |
GAD78943.1 | trpA | VEZ01S_07_01200 | VEZ01S_12_00010 | Hypothetical protein. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.448 |
GAD78943.1 | trpB | VEZ01S_07_01200 | VEZ01S_12_00020 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.447 |
GAD79447.1 | GAD79577.1 | VEZ01S_15_00010 | VEZ01S_18_00030 | Hypothetical protein. | Putative tryptophan transporter. | 0.871 |
GAD79447.1 | ddc | VEZ01S_15_00010 | VEZ01S_16_00030 | Hypothetical protein. | L-2,4-diaminobutyrate decarboxylase. | 0.509 |
GAD79447.1 | hutH | VEZ01S_15_00010 | VEZ01S_35_00090 | Hypothetical protein. | Histidine ammonia-lyase. | 0.600 |
GAD79447.1 | tnaA | VEZ01S_15_00010 | VEZ01S_18_00040 | Hypothetical protein. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.434 |
GAD79447.1 | trpA | VEZ01S_15_00010 | VEZ01S_12_00010 | Hypothetical protein. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.460 |
GAD79447.1 | trpB | VEZ01S_15_00010 | VEZ01S_12_00020 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.434 |
GAD79577.1 | GAD79447.1 | VEZ01S_18_00030 | VEZ01S_15_00010 | Putative tryptophan transporter. | Hypothetical protein. | 0.871 |
GAD79577.1 | ddc | VEZ01S_18_00030 | VEZ01S_16_00030 | Putative tryptophan transporter. | L-2,4-diaminobutyrate decarboxylase. | 0.828 |
GAD79577.1 | tnaA | VEZ01S_18_00030 | VEZ01S_18_00040 | Putative tryptophan transporter. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.715 |
GAD81024.1 | tnaA | VEZ01S_48_00140 | VEZ01S_18_00040 | Hypothetical protein. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.801 |
GAD81024.1 | trpA | VEZ01S_48_00140 | VEZ01S_12_00010 | Hypothetical protein. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.448 |
GAD81024.1 | trpB | VEZ01S_48_00140 | VEZ01S_12_00020 | Hypothetical protein. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.447 |
GAD81278.1 | cysK | VEZ01S_54_00290 | VEZ01S_01_00640 | Putative lyase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.601 |
GAD81278.1 | tnaA | VEZ01S_54_00290 | VEZ01S_18_00040 | Putative lyase. | Tryptophanase; Belongs to the beta-eliminating lyase family. | 0.440 |
GAD81278.1 | trpA | VEZ01S_54_00290 | VEZ01S_12_00010 | Putative lyase. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.493 |
GAD81278.1 | trpB | VEZ01S_54_00290 | VEZ01S_12_00020 | Putative lyase. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.436 |
cysK | GAD81278.1 | VEZ01S_01_00640 | VEZ01S_54_00290 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Putative lyase. | 0.601 |
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