STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571305_01124Unannotated protein. (411 aa)    
Predicted Functional Partners:
lptF
Unannotated protein.
 
     0.879
lptG
Unannotated protein.
 
     0.868
GCA_001571305_01125
Unannotated protein.
 
    0.868
GCA_001571305_01126
Unannotated protein.
 
    0.868
GCA_001571305_01123
Unannotated protein.
       0.788
GCA_001571305_01127
Unannotated protein.
 
    0.781
GCA_001571305_00348
Unannotated protein.
  
  
 0.746
GCA_001571305_02827
Unannotated protein.
  
  
 0.746
GCA_001571305_01118
Unannotated protein.
 
     0.736
GCA_001571305_01122
Unannotated protein.
       0.722
Your Current Organism:
Erwinia persicina
NCBI taxonomy Id: 1219360
Other names: E. persicina NBRC 102418, Erwinia persicina NBRC 102418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.