STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1Q2_04629Methyltransf_11 domain-containing protein. (227 aa)    
Predicted Functional Partners:
A1Q2_02002
Uncharacterized protein.
   
 0.952
A1Q2_07849
Protein required for pre-rRNA processing and 40S ribosomal subunit synthesis, Enp1p.
   
 0.921
A1Q2_07460
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.914
A1Q2_06206
Chaperone.
   
  0.910
A1Q2_00647
Cytoplasm protein.
   
 0.910
A1Q2_04396
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.902
A1Q2_07280
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.899
A1Q2_05547
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
    
  0.892
A1Q2_07281
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.880
A1Q2_04836
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.880
Your Current Organism:
Trichosporon asahii
NCBI taxonomy Id: 1220162
Other names: T. asahii var. asahii CBS 8904, Trichosporon asahii var. asahii CBS 8904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.