STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B655_2208Hypothetical protein. (37 aa)    
Predicted Functional Partners:
B655_2206
Putative membrane protein; PFAM: ABC-2 type transporter.
       0.426
B655_2207
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
       0.426
Your Current Organism:
Methanobacterium sp. Maddingley
NCBI taxonomy Id: 1220534
Other names: M. sp. Maddingley MBC34, Methanobacterium sp. Maddingley MBC34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.