STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXF69_25615Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)    
Predicted Functional Partners:
FXF69_00280
Unannotated protein.
 0.980
FXF69_00795
Unannotated protein.
 0.972
FXF69_10625
Unannotated protein.
 0.971
FXF69_01355
Unannotated protein.
    
 0.959
FXF69_33435
Unannotated protein.
  
 0.785
FXF69_19480
Unannotated protein.
  
 0.785
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
   0.752
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.750
rpmG
Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.748
rpmJ
Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.747
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.