STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaKUnannotated protein. (331 aa)    
Predicted Functional Partners:
FXF69_04545
Unannotated protein.
 
 0.999
dhaL
Unannotated protein.
  
 0.999
FXF69_28170
Unannotated protein.
   
 
 0.948
FXF69_03900
Unannotated protein.
  
 
 0.906
tpiA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.868
FXF69_04745
Unannotated protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.866
FXF69_29165
Unannotated protein.
    
 0.866
gpsA
Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.860
FXF69_31245
Unannotated protein.
    
 0.845
fbaA
Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
 0.826
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.