STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXF69_01035Unannotated protein. (744 aa)    
Predicted Functional Partners:
eccD-2
Unannotated protein.
  
 
 0.954
FXF69_38370
Unannotated protein; Belongs to the WXG100 family.
   
 
 0.948
GCA_001552135_06379
Unannotated protein.
   
 
 0.948
FXF69_01040
Unannotated protein.
   
   0.876
GCA_001552135_03709
Unannotated protein.
 
     0.806
GCA_001552135_03710
Unannotated protein.
 
     0.794
FXF69_38375
Unannotated protein; Belongs to the WXG100 family.
   
 
 0.716
FXF69_38365
Unannotated protein; Belongs to the WXG100 family.
   
 
 0.716
eccD
Unannotated protein.
  
 
 0.715
GCA_001552135_03711
Unannotated protein.
 
   
 0.684
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.