STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXF69_12430Unannotated protein. (220 aa)    
Predicted Functional Partners:
larE
Unannotated protein.
 
   
  0.862
FXF69_27145
Unannotated protein.
    
 0.840
FXF69_27150
Unannotated protein.
    
 0.840
FXF69_26950
Unannotated protein; Belongs to the CinA family.
    
 0.781
FXF69_27155
Unannotated protein.
    
 0.761
FXF69_41370
Unannotated protein.
    
 0.761
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.752
guaB
Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.746
FXF69_34405
Unannotated protein.
    
 0.716
FXF69_41815
Unannotated protein.
    
 0.716
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.