STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXF69_19615Unannotated protein. (268 aa)    
Predicted Functional Partners:
FXF69_33435
Unannotated protein.
   
 0.762
FXF69_19480
Unannotated protein.
   
 0.762
FXF69_28830
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.713
FXF69_19625
Unannotated protein.
       0.709
FXF69_19620
Unannotated protein.
       0.709
FXF69_22490
Unannotated protein.
 
 
 0.691
FXF69_22545
Unannotated protein.
 
 
 0.678
FXF69_18275
Unannotated protein.
 
 
 0.676
FXF69_22555
Unannotated protein.
 
 
 0.672
FXF69_18305
Unannotated protein.
 
 
 0.662
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.