STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXF69_01490Unannotated protein. (367 aa)    
Predicted Functional Partners:
FXF69_01430
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.865
dxr
Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.847
FXF69_26320
Unannotated protein; Belongs to the CDS family.
  
  
 0.839
FXF69_05960
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.836
FXF69_20630
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.810
frr
Unannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
  
 0.757
FXF69_15050
Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 
0.757
FXF69_29615
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.746
FXF69_17525
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.744
nusA
Unannotated protein; Participates in both transcription termination and antitermination.
  
    0.727
Your Current Organism:
Actinomadura chibensis
NCBI taxonomy Id: 1220554
Other names: A. chibensis NBRC 106107, Actinomadura chibensis NBRC 106107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.