STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552635_04521Unannotated protein. (591 aa)    
Predicted Functional Partners:
GCA_001552635_01772
Unannotated protein.
  
  0.940
GCA_001552635_05687
Unannotated protein.
  
  0.896
GCA_001552635_02049
Unannotated protein.
  
  0.870
GCA_001552635_03075
Unannotated protein.
  
  0.858
GCA_001552635_04519
Unannotated protein.
 
     0.822
GCA_001552635_05683
Unannotated protein.
  
  0.802
GCA_001552635_04929
Unannotated protein.
  
  0.794
GCA_001552635_06355
Unannotated protein.
  
  0.785
GCA_001552635_00526
Unannotated protein.
  
  
  0.774
GCA_001552635_06170
Unannotated protein.
  
     0.770
Your Current Organism:
Actinomadura hibisca
NCBI taxonomy Id: 1220559
Other names: A. hibisca NBRC 15177, Actinomadura hibisca NBRC 15177
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.