STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552635_04696Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_001552635_01081
Unannotated protein.
  
 
 0.805
GCA_001552635_04695
Unannotated protein.
  
    0.747
GCA_001552635_00443
Unannotated protein.
  
 
 0.499
GCA_001552635_02397
Unannotated protein.
   
    0.485
GCA_001552635_04786
Unannotated protein.
    
  0.410
GCA_001552635_04694
Unannotated protein.
  
    0.408
GCA_001552635_04693
Unannotated protein.
       0.405
Your Current Organism:
Actinomadura hibisca
NCBI taxonomy Id: 1220559
Other names: A. hibisca NBRC 15177, Actinomadura hibisca NBRC 15177
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.