STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552195_06693Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_001552195_06453
Unannotated protein.
 
     0.809
GCA_001552195_06694
Unannotated protein.
 
     0.589
GCA_001552195_02399
Unannotated protein.
  
 
   0.520
GCA_001552195_06695
Unannotated protein.
 
     0.517
GCA_001552195_03376
Unannotated protein.
  
     0.490
GCA_001552195_06696
Unannotated protein.
 
     0.485
GCA_001552195_05294
Unannotated protein.
  
     0.483
GCA_001552195_04795
Unannotated protein.
  
     0.481
GCA_001552195_01296
Unannotated protein.
  
     0.479
GCA_001552195_06668
Unannotated protein.
  
     0.470
Your Current Organism:
Actinomadura latina
NCBI taxonomy Id: 1220563
Other names: A. latina NBRC 106108, Actinomadura latina NBRC 106108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.