STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552215_06925Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_001552215_06926
Unannotated protein.
       0.788
GCA_001552215_04422
Unannotated protein.
  
 
  0.624
GCA_001552215_02319
Unannotated protein.
   
 
  0.610
GCA_001552215_04695
Unannotated protein.
   
 
  0.610
GCA_001552215_05130
Unannotated protein.
   
 
  0.610
GCA_001552215_06924
Unannotated protein.
  
    0.566
GCA_001552215_07644
Unannotated protein.
  
  
  0.506
GCA_001552215_07554
Unannotated protein.
  
  0.455
GCA_001552215_06921
Unannotated protein.
  
    0.441
GCA_001552215_06923
Unannotated protein.
       0.422
Your Current Organism:
Actinomadura macra
NCBI taxonomy Id: 1220564
Other names: A. macra NBRC 14102, Actinomadura macra NBRC 14102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.