STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552235_02337Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_001552235_02338
Unannotated protein.
 
     0.806
GCA_001552235_02336
Unannotated protein.
       0.781
GCA_001552235_02339
Unannotated protein.
       0.762
GCA_001552235_02335
Unannotated protein.
       0.685
GCA_001552235_02332
Unannotated protein.
       0.661
GCA_001552235_02333
Unannotated protein.
       0.661
GCA_001552235_02334
Unannotated protein.
       0.661
GCA_001552235_02340
Unannotated protein.
       0.542
Your Current Organism:
Actinomadura rubrobrunea
NCBI taxonomy Id: 1220567
Other names: A. rubrobrunea NBRC 15275, Actinomadura rubrobrunea NBRC 15275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.