STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552235_04742Unannotated protein. (175 aa)    
Predicted Functional Partners:
GCA_001552235_04432
Unannotated protein.
  
 0.985
GCA_001552235_01803
Unannotated protein.
  
 0.952
GCA_001552235_04907
Unannotated protein.
  
 0.934
GCA_001552235_00762
Unannotated protein.
   
 0.902
GCA_001552235_00320
Unannotated protein.
     
 0.896
GCA_001552235_04234
Unannotated protein.
  
 
 0.887
GCA_001552235_04741
Unannotated protein.
 
 
 0.863
GCA_001552235_01351
Unannotated protein.
  
 
 0.786
GCA_001552235_04614
Unannotated protein.
  
  
  0.775
GCA_001552235_04743
Unannotated protein.
 
   
 0.747
Your Current Organism:
Actinomadura rubrobrunea
NCBI taxonomy Id: 1220567
Other names: A. rubrobrunea NBRC 15275, Actinomadura rubrobrunea NBRC 15275
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.