STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552655_02911Unannotated protein. (120 aa)    
Predicted Functional Partners:
GCA_001552655_02782
Unannotated protein.
   
 0.761
GCA_001552655_01043
Unannotated protein.
     
 0.728
GCA_001552655_02058
Unannotated protein.
     
 0.728
GCA_001552655_02894
Unannotated protein.
   
  0.718
GCA_001552655_03063
Unannotated protein.
    
  0.696
GCA_001552655_01604
Unannotated protein.
   
 0.691
GCA_001552655_00166
Unannotated protein.
  
 
 0.685
GCA_001552655_01588
Unannotated protein.
   
    0.631
GCA_001552655_00168
Unannotated protein.
   
    0.606
GCA_001552655_02912
Unannotated protein.
       0.566
Your Current Organism:
Alicyclobacillus kakegawensis
NCBI taxonomy Id: 1220571
Other names: A. kakegawensis NBRC 103104, Alicyclobacillus kakegawensis NBRC 103104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.