STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552255_00568Unannotated protein. (378 aa)    
Predicted Functional Partners:
GCA_001552255_01017
Unannotated protein.
 
 0.994
GCA_001552255_03526
Unannotated protein.
   
 0.960
GCA_001552255_00155
Unannotated protein.
    
 0.959
GCA_001552255_00569
Unannotated protein.
 
 
 0.932
GCA_001552255_00241
Unannotated protein.
 
 0.923
GCA_001552255_00980
Unannotated protein.
 
 0.899
GCA_001552255_01565
Unannotated protein.
    
 0.869
GCA_001552255_01020
Unannotated protein.
  
 
 0.840
GCA_001552255_00955
Unannotated protein.
 
 
 0.837
GCA_001552255_01089
Unannotated protein.
 
 
 0.829
Your Current Organism:
Alicyclobacillus shizuokensis
NCBI taxonomy Id: 1220573
Other names: A. shizuokensis NBRC 103103, Alicyclobacillus shizuokensis NBRC 103103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.